PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.422
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 260aa    MW: 29582.8 Da    PI: 5.4593
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.422genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY231.6e-071141602059
                                   S-EEEEEE-ST...T---EEEEEE-S....SSTTEEEEEEES--SS- CS
                          WRKY  20 fprsYYrCtsa...gCpvkkkversa....edpkvveitYegeHnhe 59 
                                     r+YY+C++    gCp+kk v+++a    +d   + + Y  +H+++
  evm.model.AsparagusV1_02.422 114 RRRNYYKCAHFkgqGCPAKKTVQQKAynenDDAPKFRVSYIMQHTCK 160
                                   569******977889********8752222677899********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MVSSHNQTHW QQENKRRSLK MEPSNRTGVV IEKINHTKEI VVQLRALQLP LGVTDSSSEL  60
ARDLFDEAIR SLTSASLELR TATLPVEFKA SDEDDGRMNL SKRKRRRRPS EDDRRRNYYK  120
CAHFKGQGCP AKKTVQQKAY NENDDAPKFR VSYIMQHTCK NFETNSKPIT SDMGCEFMIN  180
QEDESNASSS PNKSQNNDEA LSAITAEFTE LLHSSPKEQE ATTSATGNWE EMFGFGGGDG  240
MAWDYEAMIN EFFWSFVEE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107KRKRRR
2102108KRKRRRR
3102116KRKRRRRPSEDDRRR
4103107RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.29e-08WRKY family protein