PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.425
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 251aa    MW: 28825.3 Da    PI: 5.1172
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.425genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.71.7e-1768121356
                                   --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                      Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                   k+++++ eq+++Le+ Fe  +++  e++ eLA+ lgL+ rq+ +WFqNrRa++k
  evm.model.AsparagusV1_02.425  68 KKRRLNLEQVRTLERNFELGNKLEPERKMELARALGLQPRQIAIWFQNRRARWK 121
                                   4557899**********************************************9 PP
2HD-ZIP_I/II123.21.3e-3967158192
                   HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81 
                                   ekkrrl+ eqv++LE++Fe  +kLeperK+elar+Lglqprq+a+WFqnrRAR+ktk+lEkdy+ L+r+++ +keen++L+
  evm.model.AsparagusV1_02.425  67 EKKRRLNLEQVRTLERNFELGNKLEPERKMELARALGLQPRQIAIWFQNRRARWKTKKLEKDYDELRRELEVVKEENDALQ 147
                                   69******************************************************************************* PP

                   HD-ZIP_I/II  82 keveeLreelk 92 
                                   +++++L++el 
  evm.model.AsparagusV1_02.425 148 EHNKKLKAELL 158
                                   *******9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MACNGIPSSF FPQNFMYQLQ SQMEESHPLL PIATMPQDFR GILKSPLSFD EMGVEDELSD  60
DCSQAGEKKR RLNLEQVRTL ERNFELGNKL EPERKMELAR ALGLQPRQIA IWFQNRRARW  120
KTKKLEKDYD ELRRELEVVK EENDALQEHN KKLKAELLSL KGRGGTEPII NLNKETEGSS  180
SNRSTENSSD INLDISKSPP NPNQAIAYQF LHCPKTENGI AIGQEENFCN IFGVEDQSAF  240
WAWSEQQHFH *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.12e-70HD-ZIP family protein