PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.546
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 314aa    MW: 35968.4 Da    PI: 6.271
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.546genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.61.3e-49291542128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                                   +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgy
  evm.model.AsparagusV1_02.546  29 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALATIGEKEWFFYVPRDRKYRNGDRPNRVTTSGY 108
                                   79***************************.89***************8778899*************************** PP

                           NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   Wkatg d+ + s++++ +glkktLvfy+g+ap+g +++W+m+eyrl
  evm.model.AsparagusV1_02.546 109 WKATGADRMIRSENSRPIGLKKTLVFYSGKAPRGIRSSWIMNEYRL 154
                                   ********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAIATTMSTN SEDRRDGKIE DGHEYDLVMP GFRFHPTEEE LIEFYLRRKV EGKRFNVELI  60
TFLDLYRYDP WELPALATIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK ATGADRMIRS  120
ENSRPIGLKK TLVFYSGKAP RGIRSSWIMN EYRLPQNETD RYHKEISLCR VYKRPSIEDH  180
SHLPGSLCVK PSSSNVTPTT SDQKHKSLAE DSSSPDVDKI QERSIVYNTM TVNPMSVMEE  240
EVVPQITRCN AIAELSGMAG YNQSGFLNDQ PQPQPQLLPI NVLPDPFLGI SDKLWDWSSL  300
PEDGRDYGGN SSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.21e-106NAC family protein