PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.664
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 198aa    MW: 21544.4 Da    PI: 9.4874
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.664genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.39.4e-13427496128
                           NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   + + v +kk Lvfy g+apkg kt+W+mheyrl
  evm.model.AsparagusV1_02.664  42 SPKPVAIKKALVFYAGKAPKGDKTNWIMHEYRL 74 
                                   45679**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGTKSGIFSH QETGNIRTGR DRTGQPVGVT GRRPEPIKPV GSPKPVAIKK ALVFYAGKAP  60
KGDKTNWIMH EYRLADVDRS ARKKNSLRKP NIAPHVTSAM PPPPTFPPTK DFSYFGPSES  120
LPMLHADSSC SSHVLSPDLT CESKEAESQL RWEELGRALG APFNYGDATV PFPPLDCGAQ  180
FSNDPLQDLF ASLQRPF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-38NAC family protein