PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.665
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 780aa    MW: 88721.4 Da    PI: 5.4695
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.665genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.52e-2230114190
                          FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                                   +fY+ YAke+GF vrk+  k++  +g +++r f+C+keg+ ++ k+     +++r+ +rtgCka+++v+ ++dg+++vt++
  evm.model.AsparagusV1_02.665  30 QFYCLYAKEMGFGVRKHFVKRR-SSGLVYSRVFCCYKEGFCRSLKEG----KKPRPDSRTGCKAHITVRIMDDGRFRVTEF 105
                                   6*************99876665.8999*************9998776....9***************************** PP

                          FAR1  82 eleHnHela 90 
                                   + +HnHel 
  evm.model.AsparagusV1_02.665 106 DPNHNHELI 114
                                   *******95 PP
2FAR173.35.2e-23176263190
                          FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                                   +fY +YA ++GFsvrk+  k+ + +g i++rt++C keg++++++++ ++er++++ +r gC a++++k +k+g+++v+ +
  evm.model.AsparagusV1_02.665 176 NFYFNYAINIGFSVRKHLIKR-RASGLIYSRTYCCHKEGHTRKRDEQ-VQERNPKPYDRSGCLASMTIKITKSGRYRVIVF 254
                                   6*************9987666.59999******************99.********************************* PP

                          FAR1  82 eleHnHela 90 
                                   e +HnH+l+
  evm.model.AsparagusV1_02.665 255 EPKHNHALV 263
                                   ******996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MSEPATENAA DDSWVPRNDM VFESDEKAYQ FYCLYAKEMG FGVRKHFVKR RSSGLVYSRV  60
FCCYKEGFCR SLKEGKKPRP DSRTGCKAHI TVRIMDDGRF RVTEFDPNHN HELIAKANET  120
ETEPIDKPAS VKKAAKKNVN YRSISRSYIP SKPTNFTDDR VPRVDMEFEN DEEAYNFYFN  180
YAINIGFSVR KHLIKRRASG LIYSRTYCCH KEGHTRKRDE QVQERNPKPY DRSGCLASMT  240
IKITKSGRYR VIVFEPKHNH ALVVPTKAHL FKWQWRRGLI KSPNDQRLSS EQAETQVPTS  300
ITSHNKNAMM LSSYEIMDTA TAYYQTTLDS DAADLSKSII KGIFNNFQLQ AGANEAYKRF  360
SSEFQTICNL LKLHIPEFVN HHPWHSQRSA RIRAVTGNLG ALPDPLAGSS GNGYHPSEDI  420
EELVSVNEDA RLTDAETART LVEVNSKATL MFSGLSDDEI HENIIWPDLP YLTDERGDIY  480
FEVSNHEDVL QSLIGDDKIV QVIIGLDNLE MLEEMDFSGP SNLDFGTEEI VDEDSDVDED  540
SDEDAFTILE DEGDDLISSE TSNDWSNLET MQSSHPMYFA RKIEEVVSNV NLDWMDQPSA  600
SIVVQGVLRP AFQEENSFIK KHLSVGGTNN NKTHHLGEVV ETNMKEELDK DQSLHSATAF  660
YKLEMIRIQL VSSYGTESLV EVQDFRRARP DVVVRHSAKI ISQLEAAGDK TFQALKSLCW  720
RLKSIQVEEA AITGIDSLGF DLRICSGTQV QTLRFAFKTR ATSELNAEKQ LHDLLFPRF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.19e-22FAR1 family protein