PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.737
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 386aa    MW: 42706.7 Da    PI: 9.3415
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.737genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.52.6e-06157180123
                                   EEETTTTEEESSHHHHHHHHHH.T CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                                   ++C+dCg+ F+ + +L++H+ + H
  evm.model.AsparagusV1_02.737 157 FPCSDCGEIFTKSVSLEVHQAVkH 180
                                   89******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MPPPIERSKI SKAPIQLSSP LSKSMDSRKP TNRNSRKSHK QGFRSFFSCK YHETAVEVEK  60
KKKKKIVRKI GWSSSLCNSR ESSKVMQENC ENVEGTSSSS SSFSASSSNN NLSVSITSSS  120
SSSSLGGPFR GMHLRKFSGC YESNGVSKVP SLVSGAFPCS DCGEIFTKSV SLEVHQAVKH  180
AVSELESEGT SCKIVEIIFK SSWLKEKPPT CKIERILKIR HSQKTFTEFE SYRDSIKTKA  240
NKLTRKHQRC IADGNELLRF YCTSFSCFLG HSGSTGLCIS VQSCKLCSII KDGFKLDELG  300
KIRTMATSGQ AHDAAKIEED GEERAMLVCR VIAGRVKKKN EEGNLEEFDS VSSNIGVYSS  360
LDELLVFHPE AILPCFVIIY RSFQF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.12e-79C2H2 family protein