PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.783
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 222aa    MW: 25212 Da    PI: 8.646
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.783genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3103.11.5e-3243143195
                                   EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 
                                   f+k ltpsdv+k++rlv+pk++ae++    g++ e++  l++ede g++We++++y+ +s++yvltkGW++Fvk+++L++g
  evm.model.AsparagusV1_02.783  43 FEKPLTPSDVGKLNRLVIPKQHAEKYfpldGESGEKGSLLSFEDELGKQWEFRYSYWTSSQSYVLTKGWSKFVKDKKLDAG 123
                                   99***************************9555557779****************************************** PP

                                   -EEEEEE-.SS.SEE..EEE CS
                            B3  78 DfvvFkld.gr.sefelvvk 95 
                                   D+v+F++  g+ +++++++ 
  evm.model.AsparagusV1_02.783 124 DVVIFQRFrGHgTDERFYID 143
                                   ******55244455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MNQLAQNPSN PWIWQPTMNA HNPHYSQMHR QQQEGTYIKE PMFEKPLTPS DVGKLNRLVI  60
PKQHAEKYFP LDGESGEKGS LLSFEDELGK QWEFRYSYWT SSQSYVLTKG WSKFVKDKKL  120
DAGDVVIFQR FRGHGTDERF YIDSRRRGSI EANSRVVARP DAENPWSSCA SPHGYMNSVN  180
SGQQASSSTR GSSRRLRLFG VNLECGPDPA EPEHLASGSW N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.11e-51B3 family protein