PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.959
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 244aa    MW: 27833.4 Da    PI: 4.962
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.959genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding461.2e-141461148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  rg+WT eEd++l+d +   G  +W+++++  g+ R++k+c++rw +yl
  evm.model.AsparagusV1_02.959 14 RGPWTMEEDQKLIDFILNNGIQCWRLVPKLAGLMRCGKSCRLRWINYL 61
                                  89********************************************97 PP
2Myb_DNA-binding58.41.6e-1867110146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                   rg ++++E+++l++++ +lG++ W++Ia++++ gRt++++k++w++
  evm.model.AsparagusV1_02.959  67 RGDFSEDEEDILIELHSRLGNR-WSKIASHFP-GRTDNEIKNHWNT 110
                                   899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGRKPCCDKV GLKRGPWTME EDQKLIDFIL NNGIQCWRLV PKLAGLMRCG KSCRLRWINY  60
LRPDLKRGDF SEDEEDILIE LHSRLGNRWS KIASHFPGRT DNEIKNHWNT RIKKKLKLQG  120
IDPITHEPIK QSEDGHDSVS NITVDDENKV LDANANATSQ DKNKIVPPSQ EKEENNNEAI  180
LNADGRLHET INLTMDGECS VEGSSLCWDA IDSFPSWEAM YYLEDVLFFM NDPLVSIDSF  240
GKD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.12e-78MYB family protein