PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1006
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 205aa    MW: 23163.9 Da    PI: 6.0263
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1006genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.44.3e-1043771548
                                   HHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                Myb_DNA-binding 15 avkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48
                                   a++ + g+  +W++Ia +++ gRt++++k++w+++l
  evm.model.AsparagusV1_03.1006 43 AHQIHEGKvtRWSLIAGRLP-GRTANDVKNFWNTHL 77
                                   7899999999**********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MKVLTGPTSN TSRTLKYIHR LHSASTTNHM LLLAPMFNST LLAHQIHEGK VTRWSLIAGR  60
LPGRTANDVK NFWNTHLSKQ LLAEKHGKEA EAAYVEVIKP QPQTIPWNWK WSKDNEASES  120
NNQQEEANIL KHLSTSSSTN ATCLESKNFS ASNIEEVGMM QELQADFRSE DIGSFGHDDF  180
LLEGFLGWED MRADISLWSD FEYI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.14e-14MYB family protein