PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1038
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 242aa    MW: 26604.1 Da    PI: 7.0617
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1038genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.8e-11124171455
                                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+ Lq
  evm.model.AsparagusV1_03.1038 124 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 171
                                    8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MDPTSLISQT PIPEIWQFPL VGVPPGTRIN GRDSSIAEST VTDHXXXXXX XSHLSSSPLA  60
AAMTREAKRI RGMKPRDENG ESKTEAEASS GLCNKNTDQN TQPSEAPKQD YIHVRARRGQ  120
ATDSHSLAER ARREKISERM KILQDLVPGC NKVIGKASVL DEIINYIQAL QRQVEFLSMK  180
LEAVNSRMNS GIEGFPSKDF GTQAYETPSL AFSSQAPREY GQGSATEWLH MQVGGAFERV  240
T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.18e-81bHLH family protein