PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1090
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 212aa    MW: 24047.9 Da    PI: 5.8891
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1090genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.9e-171356146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                                   +g++T+eE+ ++ + +++lG++ W+ Ia++++ gRt++++k++w++
  evm.model.AsparagusV1_03.1090 13 KGPFTEEEESIIRQQHRMLGNK-WSVIAKHVP-GRTDNDVKNFWHT 56
                                   79********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
LRWINYLCPG LKKGPFTEEE ESIIRQQHRM LGNKWSVIAK HVPGRTDNDV KNFWHTTIKK  60
KIVEEENQEG SQGTNHHFFT NLLNVPDLSQ FKIPRPSASF LSLEMKKTNN WKDVVQPSSL  120
QVPQTSLGLS LCDPTDLIWY KEQNPELFMD CSNSGSSSSS VKGKEKVDQV DEINGERVNQ  180
VITNGDDGLG FDHELVDGWW NASLWRPDGS H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.11e-25MYB family protein