PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1160
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Dof
Protein Properties Length: 242aa    MW: 26016.8 Da    PI: 8.757
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1160genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof42.91.1e-1323731361
                         zf-Dof 13 stntkfCyynnyslsqPryfCkaCrryW.t.kGGalrnvPvGggrrknkks 61
                                      t+fCyynnyslsqPr+f ++ +r   t +  +l    v +++rknk+ 
  evm.model.AsparagusV1_03.1160 23 RVRTQFCYYNNYSLSQPRHFLQGVQRATdTrAPSTLPECSVAAAARKNKRL 73
                                   468***********************75241457899999********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MAQQAARQRL PQPQQLSARA ATRVRTQFCY YNNYSLSQPR HFLQGVQRAT DTRAPSTLPE  60
CSVAAAARKN KRLQETSPAP QPSSSSRAAA AATVTLGLGG LIPHSDQLST GFVNNNSSNL  120
QSCFLNNEYP ASFGSQAASL LVSSMKQPRK VEDRYAQPAL PYEGPQQGYE SLNLGFVKDV  180
KVEDGNNLNN MGNNSAGDQW QANYPFEALN GASDSSYMYW SSAMGGSVWP DPSSSSVAPL  240
I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.11e-09Dof family protein