PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1207

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

GRF

Protein Properties

Length: 198aa MW: 23603.1 Da PI: 9.4921

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1207	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.9	4.2e-24	65	108	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rC+RtDGKkWRCs+++ ++k+CErH+hrg++ srk +e evm.model.AsparagusV1_03.1207 65 DPEPWRCKRTDGKKWRCSKEAFLDSKYCERHMHRGKKSSRKLVE 108 79**************************************9986 PP
2	QLQ	35.7	2.7e-13	10	43	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT +Ql +++ Q l++ y++++ PvP++L+ + evm.model.AsparagusV1_03.1207 10 PFTESQLKEFELQTLIFNYIISGIPVPSHLITHF 43 8*****************************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MMMMVNQRHP FTESQLKEFE LQTLIFNYII SGIPVPSHLI THFKRSIYFF DHYPSMRFVK 60 KTEEDPEPWR CKRTDGKKWR CSKEAFLDSK YCERHMHRGK KSSRKLVEFP KLALNNTFRS 120 IDNDTQLILG PSSPCNQSYK CYNFFKEESE EEKRKKEAQK AKPLLCLFSE SDEKRKRSWV 180 DTEEAYYSKT QLSISIL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	1e-29	GRF family protein