PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1219
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Nin-like
Protein Properties Length: 360aa    MW: 40042 Da    PI: 4.72
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1219genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK75.56.4e-24264314252
                         RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                                    ++++++ d   yF+l i dAAke g+c+T+LK+iCR+yG++RWP+Rk+ks+
  evm.model.AsparagusV1_03.1219 264 TANLHIRDFVDYFHLRIVDAAKEFGICPTALKKICRKYGMERWPYRKVKSI 314
                                    68999999*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDCLDQFENL DWLREIEIEI GDDGGLQKCI EPVNEEIPHP LPSVDNNEEE TVHANLGSQG  60
LVASGPFDCS GCTLLREVVH TNGLETARLV IHGGLGVFYH AMLEYTVDGL PRTSEPSFMD  120
FSALTYEQVK QLLIDYGLLR ASNGYIITQD SVSSFYDALC VRVNFDVPST SNNEYFDVPS  180
TNNNETQLPG QGLPQSSTVV PSNELIRTEN TGISAQRETT ENLYVSSNVL PLPPQGLYQS  240
SPIVASNDPI RTEKTGIAAQ RERTANLHIR DFVDYFHLRI VDAAKEFGIC PTALKKICRK  300
YGMERWPYRK VKSIDNQIKK LQNDLLAQGG QEANSTQMEI ERLRAQRVRA CGGLRSSRL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17150.15e-14Nin-like family protein