PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1221
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 695aa    MW: 77208.1 Da    PI: 6.2875
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1221genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox634.5e-201469156
                                   TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                       Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                                   +++ +++t+ q++eLe +F+ +++p++++r +L++ lgL+ +q+k+WFqNrR+++k
  evm.model.AsparagusV1_03.1221 14 KKRYHRHTPRQIQELEGMFKLCPHPDEKQRMRLSRDLGLEPKQIKFWFQNRRTQMK 69
                                   678899***********************************************998 PP
2START147.31.4e-462094342206
                                    HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGC CS
                          START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeq 71 
                                    la  a++el+++++ +ep+W k      e +  +++ ++f++ +        ++ea+r+sgvv+m +  lv  ++d+  +
  evm.model.AsparagusV1_03.1221 209 LATNAMEELIRLVQTDEPLWIKPGtdgrEVLHLETYDRIFSKPGHqflgpdTRVEASRDSGVVFMSPGALVDMFMDSV-K 287
                                    67899*****************98777744444555555533333689******************************.* PP

                                    T-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-T CS
                          START  72 Wdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppess 140
                                    W e ++     a  +ev+ sg      g l lm+ e+q lsp+vp R+f+f+Ry++q    +wv+ dvSvd +++p+   
  evm.model.AsparagusV1_03.1221 288 WMELFPtivsNARNIEVLASGmggsrsGSLILMYGEFQILSPVVPtREFLFLRYCQQIDHSSWVVTDVSVDFPRDPNLLG 367
                                    *99999999999999999999999*****************************************************977 PP

                                    TSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                          START 141 svvRaellpSgiliepksnghskvtwvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                                    +  R ++lpSg+li++++nghskv wveh++ +++     l++ lv+sg+a+ga++wv tl r ce+
  evm.model.AsparagusV1_03.1221 368 PPSRNRRLPSGCLIQEMPNGHSKVSWVEHTEIEDKNQtLGLFQDLVHSGMAFGAQRWVTTLLRMCER 434
                                    77788***************************9987746799*********************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    
MSSGDEQDAQ ERRKKRYHRH TPRQIQELEG MFKLCPHPDE KQRMRLSRDL GLEPKQIKFW  60
FQNRRTQMKA QHERQDNCSL RAENDKIRCE NIAMREALKN IICPNCGGPP VNEDSYFDEQ  120
KLRMENARLK EELDRVSSIT SKYLGRPITQ LPPIQPVSVS SLDLSVGGFV NPGFGPSLDL  180
DLLSGSSSSI PFPFPAPLSD IEKPIMAELA TNAMEELIRL VQTDEPLWIK PGTDGREVLH  240
LETYDRIFSK PGHQFLGPDT RVEASRDSGV VFMSPGALVD MFMDSVKWME LFPTIVSNAR  300
NIEVLASGMG GSRSGSLILM YGEFQILSPV VPTREFLFLR YCQQIDHSSW VVTDVSVDFP  360
RDPNLLGPPS RNRRLPSGCL IQEMPNGHSK VSWVEHTEIE DKNQTLGLFQ DLVHSGMAFG  420
AQRWVTTLLR MCERFHCLMG TGADTRDLVG VIPTPEGRMS MMKLSQRMLN IFCNSLCPSN  480
GHQWNTLSGL NEVRVRFIPH KSADPGQPNG VVLSAATSTW LPLSCQRVFS FFKDERTRAQ  540
WDVLSNGNMV QEVTNITTGL NPGNSISLLR ALTPDQNSML ILQESCTDAS GSIVVYAPVN  600
LQSMDIVMSG EDTSYIPLLP SGFAILPDGR PSNGLAASTS SNPISGSSGS LLTITFQILM  660
SSLPTAKLNT ESVESVNRLI SETVHNIKAA LNCP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein