PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.129
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YB
Protein Properties Length: 145aa    MW: 15383.9 Da    PI: 4.7779
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.129genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB147.62.6e-461811797
                         NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                                  mk+ lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plk+yl++yre+ege+
  evm.model.AsparagusV1_03.129  1 MKRSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKTYLNRYRETEGER 81
                                  9******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MKRSLPANAK ISKEAKETVQ ECVSEFISFI TGEASDKCQR EKRKTINGDD LLWAMTTLGF  60
ENYVGPLKTY LNRYRETEGE RGDDQLDEEV NLVNPSSSQA GSGSNPTEFS GAGGFYPAAG  120
QGFGGSVVGY GINGGGGSVH GLKY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-50NF-YB family protein