PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1552

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 1140aa MW: 127903 Da PI: 6.2083

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1552	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81.3	2e-25	28	167	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkr 73 lp+G+rF+P+deel+++ L++ eg+ + ++ + ++e + +++ P++Lp +k++ + yfF+k+ k+++++++ evm.model.AsparagusV1_03.1552 28 LPRGVRFDPSDEELMWHLLAETGEGEAephpfIGEFIIsLNEDnQTFYSSPHKLP-GIKKDGSLSYFFHKSLKAHENKRQ 106 699************9999999988776663333343555547999***.677778888*******9999 PP NAM 74 knra.....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 r+ + W++ gk+k+v+ +g ++glk+++v+y ++ k++kt+W+mh+y++ evm.model.AsparagusV1_03.1552 107 MPRKilngdLGNVCWHKIGKTKPVCI-DGVQKGLKTIMVLYmsMSDSDKPKKTNWMMHQYHV 167 99973444434778********.99********6545888999*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1140 aa Download sequence
MERPRARRQI DGMRRSSIAA CRWNWPGLPR GVRFDPSDEE LMWHLLAETG EGEAEPHPFI 60 GEFIISLNED NQTFYSSPHK LPGIKKDGSL SYFFHKSLKA HENKRQMPRK ILNGDLGNVC 120 WHKIGKTKPV CIDGVQKGLK TIMVLYMSMS DSDKPKKTNW MMHQYHVGGE EHVEGDLVIS 180 KIFYQVKFRQ DDKIAHDLGL NNTAGTEEKV AVAPRLCGIR GHAQNSNSIS MEVPCQAEEK 240 RTYAGLRNFD YNNGFSKEAS NINISLSQFL SDPQQQENDN LACPGHAQHQ SHCGLEVERS 300 KSCISDKAEI SHHGREEVLD VVMDNYDPKE SSYSGKMYFN TAQEGKSSWN MLTSSQSALD 360 GQGHTRSSFL TPAPEVKFET SGQAGFDLHD SNMDDHSVLS GHSTQVKVEP FYHMQQISCN 420 EVSDSISPAA VGMSELLCES GRNDEIDHVT LQERYKLMLS SRNRALDGQS NLEFSGNIEK 480 CATVFASHNR IQGKDSEILP REERREAPLV HLESSDNVCA PEDSSFRLNT NNMKNCFGGN 540 IKDGIQPNNA QFLHEECHHH STQYDYARSN PVTDSPGVVL SDGHLAVGQS FPSLMLEADR 600 SDENGASGNL LACEASSPEV RLPVNTREPG HLHDMDATMH SSMTAPCLCE VTSPDDSSPG 660 RCKSQQHQEH SCRCSDGTGI LGAELLDSVE RILHHNDCNH PSKTTKFVFP IEVKAEPSEE 720 ITKCIPEKNA KELSSSFSER FSSSNKNLLA SVLSSCSVSG RHEDHPSILP EIYIVKKENI 780 DGPATDFIDH IPLMERMQML SSTSVANLSH DKSVDNALQA LPSPECGSSN VNPEKKRFSL 840 RRKRKKTATD SVEAALEEDA PGLLQVLLDK GITVEEIKLY GIVDNNADLP ICSSEDSFEE 900 LETVIAKLFS EGPSVFKFPH VRQIKGFKAV YCLACLISLI EQARYLRFHR SPVEWGWCRD 960 LQSFIFVFER HNRIVLERPE YGYATYFFEL VGSLPIDWQI RRLVTAMKLP CCSRTILLEN 1020 KPLVVGEDLT EGEALVMEGY GWIRNTGLGT LLNYCDRVVH DKKMERYNSE WRNKIGKLLM 1080 KGHDGGRTIL SNLPKKVARY MEYRNPEVKQ DAPVPSNLPK KVAQYIEYQH PEVKLELEV*

Sequence ? help Back to Top

Protein Sequence Length: 1140 aa Download sequence

MERPRARRQI DGMRRSSIAA CRWNWPGLPR GVRFDPSDEE LMWHLLAETG EGEAEPHPFI  60
GEFIISLNED NQTFYSSPHK LPGIKKDGSL SYFFHKSLKA HENKRQMPRK ILNGDLGNVC  120
WHKIGKTKPV CIDGVQKGLK TIMVLYMSMS DSDKPKKTNW MMHQYHVGGE EHVEGDLVIS  180
KIFYQVKFRQ DDKIAHDLGL NNTAGTEEKV AVAPRLCGIR GHAQNSNSIS MEVPCQAEEK  240
RTYAGLRNFD YNNGFSKEAS NINISLSQFL SDPQQQENDN LACPGHAQHQ SHCGLEVERS  300
KSCISDKAEI SHHGREEVLD VVMDNYDPKE SSYSGKMYFN TAQEGKSSWN MLTSSQSALD  360
GQGHTRSSFL TPAPEVKFET SGQAGFDLHD SNMDDHSVLS GHSTQVKVEP FYHMQQISCN  420
EVSDSISPAA VGMSELLCES GRNDEIDHVT LQERYKLMLS SRNRALDGQS NLEFSGNIEK  480
CATVFASHNR IQGKDSEILP REERREAPLV HLESSDNVCA PEDSSFRLNT NNMKNCFGGN  540
IKDGIQPNNA QFLHEECHHH STQYDYARSN PVTDSPGVVL SDGHLAVGQS FPSLMLEADR  600
SDENGASGNL LACEASSPEV RLPVNTREPG HLHDMDATMH SSMTAPCLCE VTSPDDSSPG  660
RCKSQQHQEH SCRCSDGTGI LGAELLDSVE RILHHNDCNH PSKTTKFVFP IEVKAEPSEE  720
ITKCIPEKNA KELSSSFSER FSSSNKNLLA SVLSSCSVSG RHEDHPSILP EIYIVKKENI  780
DGPATDFIDH IPLMERMQML SSTSVANLSH DKSVDNALQA LPSPECGSSN VNPEKKRFSL  840
RRKRKKTATD SVEAALEEDA PGLLQVLLDK GITVEEIKLY GIVDNNADLP ICSSEDSFEE  900
LETVIAKLFS EGPSVFKFPH VRQIKGFKAV YCLACLISLI EQARYLRFHR SPVEWGWCRD  960
LQSFIFVFER HNRIVLERPE YGYATYFFEL VGSLPIDWQI RRLVTAMKLP CCSRTILLEN  1020
KPLVVGEDLT EGEALVMEGY GWIRNTGLGT LLNYCDRVVH DKKMERYNSE WRNKIGKLLM  1080
KGHDGGRTIL SNLPKKVARY MEYRNPEVKQ DAPVPSNLPK KVAQYIEYQH PEVKLELEV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	842	846	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	2e-56	NAC family protein