PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1628
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 387aa    MW: 43171.5 Da    PI: 4.9467
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1628genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind103.32e-32191112102
                                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS
                   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 
                                    Flkk y++++d+ ++e++sw ++++sfv++de  f++++Lp+yFkhs++ SFvRQLn+YgF +v+++++        +e+
  evm.model.AsparagusV1_03.1628  19 FLKKCYDLVDDPMTDEIVSWGDENDSFVIWDEYAFERDILPRYFKHSKLGSFVRQLNTYGFLRVHNTKG--------VEY 90 
                                    9****************************************************************9996........6** PP

                                    EESXXXXXXXXXXXXXXXXXX CS
                   HSF_DNA-bind  82 khksFkkgkkellekikrkks 102
                                    +h+ F++g+k+lleki rk s
  evm.model.AsparagusV1_03.1628  91 AHDAFRRGQKNLLEKIARKIS 111
                                    ******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MENESATSMS APQPSAKPFL KKCYDLVDDP MTDEIVSWGD ENDSFVIWDE YAFERDILPR  60
YFKHSKLGSF VRQLNTYGFL RVHNTKGVEY AHDAFRRGQK NLLEKIARKI SGKDATDPQH  120
QNQARGTSSN AELQNSVLLQ EIAQLKKIQN LLIHNLQTVI QNQIKTDKEL CNMTKKVQEM  180
EENQKETVSM LEMFLQHLNI MSQPGQQNGA ISEPSKRLRL SRPGEGRDCL LTELQPSFTN  240
STKPMPVPTN LQWANQVNIL QANGDMNPNT FIQPGLQNGT EEPISELIDC LGFSCQQQGL  300
SGGSNTSCGH VINQNVMPMR NSDLCMNVGA SSSEAISSLP AKGPTDISST LEKLIEDNDE  360
VDPGFMIHDS LKEFDISAQG FQRGTF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.16e-43HSF family protein