PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1641
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GATA
Protein Properties Length: 251aa    MW: 27448.1 Da    PI: 7.7145
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1641genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.71e-15140176135
                           GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                    C+nCg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  evm.model.AsparagusV1_03.1641 140 CQNCGISEklTPAMRRGPAGPRSLCNACGLMWANKGT 176
                                    **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MQLMGSNSNQ LTLLFQGEVY VFESVTPEKV QAVLLLLGGC ELPPGVANAG FDRGFDDILR  60
RTNMPARRMA SLMRFREKRK ERNFDKKIRY TVRKEVALRM QRRKGQFVGK ANPQEGALAS  120
TSGDPDQNLN QDETRQDNKC QNCGISEKLT PAMRRGPAGP RSLCNACGLM WANKGTLRCP  180
SKVPKCSTSD PAHPDEHGEG INQAVVVGDG KMLLNNSNDD DSAAAPTEIE AADIPSVVAN  240
EMQEDLKAEL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-57GATA family protein