PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1693

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 261aa MW: 29230.7 Da PI: 7.8755

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1693	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+ +W++++ g+ R+ k+c++rw +yl evm.model.AsparagusV1_03.1693 14 KGPWTPEEDIILVSYIQEHGPANWRSVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48.9	1.5e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++l++++ ++lG++ W+tIa++++ Rt++++k++w+++l evm.model.AsparagusV1_03.1693 67 RGNFSVQEEKLIIHLQALLGNR-WATIASYLP-ERTDNDIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MGRPPCCEKF GVKKGPWTPE EDIILVSYIQ EHGPANWRSV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF SVQEEKLIIH LQALLGNRWA TIASYLPERT DNDIKNFWNT HLKKKLQKVN 120 NNNNTISNNI HQPIPKGQWE RRLQTDINLA KQALNEALRI NNPTDTITSP TSTSPSSSSS 180 SYPTYASSTE NISRLLEGWM SSRKPTNSLE VSETESKDTS SGGQEPLSLI ETWFFDDGLG 240 GENNEGLFDL SVDNVACGMF *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62470.2	1e-92	MYB family protein