PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1706
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family AP2
Protein Properties Length: 176aa    MW: 19471.5 Da    PI: 4.8706
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1706genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.19.1e-0845782055
                            AP2 20 rdpsengkr....krfslgkfgtaeeAakaaiaarkkleg 55
                                   r+      +    ++++lg f+t+ eAa+a+++a+ + +g
  evm.model.AsparagusV1_03.1706 45 RV------CshqiRYVYLGLFDTETEAARAYDKAAIRCNG 78
                                   33......12236**********99**********98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MASSSMQPPT PTPIYSSSAS SSTKNSQQSP VLSRSGWISS GGRVRVCSHQ IRYVYLGLFD  60
TETEAARAYD KAAIRCNGKD AVTNFDPSIY QDELNCDSSN GDQTLELSLG SSGLKRGNMD  120
QIDEESSVRI DQIVPMVFES DWKTSDRNTR IKERGEHIPP EDSFEVARRV KEMYC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.15e-26AP2 family protein