PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1708
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 91aa    MW: 10181.4 Da    PI: 8.5297
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1708genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.5e-0719591454
                                   HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                   d+i +  ++L++llP+  + +  + s + +L++++ YI+sL
  evm.model.AsparagusV1_03.1708 19 DQIADLVSKLQSLLPETQARRTDRASASRVLQETCSYIRSL 59
                                   6899999*********75778888***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRRSRSRQ SSSSRITDDQ IADLVSKLQS LLPETQARRT DRASASRVLQ ETCSYIRSLH  60
REVDDLSERL SELLETSDTA QAAIIRSLLM *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-22bHLH family protein