PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1989
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 372aa    MW: 41396.1 Da    PI: 8.0363
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1989genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.83.9e-052344223
                                   EETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                                   +C+ Cg+ F+r  +L +H ++H
  evm.model.AsparagusV1_03.1989 23 VCEQCGMKFKRVQDLGKHRNKH 44
                                   7*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MEAASSRASP ETSITENPPM AIVCEQCGMK FKRVQDLGKH RNKHKIDEEV EKLRKAQKAE  60
QVGENVAVQI SDEGVQAKVL EEAHQPKQAE AKKAVQASDE VVQEKVLEKA SKTDQVEAKI  120
PLHACNEEVE HDSSSQHEGP IGTCLFCMKF THLQLAIDRS SIGRRISRAI SKSMRFRKKQ  180
RQPAMAQCRA GCSSNVMGNT DEAFNLNTVA NTESSSVNTK HDRSNNRIEE EGAGAKRART  240
QREQHQLSTA QDDADYSSNV ASNVHAGFMP STVAGTSADT GYGRNKHRIN EEAIITKRTR  300
MRREQRQLTA TWSSTDVAFD PNKANIISNS TDQGYVRSKH GIDREYARTK KRVVADEFDD  360
CNEELDLTLR L*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175181RFRKKQR