PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2136
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 187aa    MW: 20441.9 Da    PI: 6.5139
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2136genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.0002801151454
                                    HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                            HLH  14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                    d++++++++L++l+ + +      K + a++L +A  YIk L
  evm.model.AsparagusV1_03.2136  80 DKLRDRISTLQQLVSPfC------KSDTASVLHEALGYIKFL 115
                                    7899************77......99**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MESEEASFME LLGSELLYLA PDHGVCEKLS LNSSLTFTQS SSSSSTTSST AEEVTTETKA  60
HKKQKKGPSA YLSTIKVKKD KLRDRISTLQ QLVSPFCKSD TASVLHEALG YIKFLHDQVQ  120
VLSSPYLQPS LPKTASLQDE EQRTSDLRSR GLCLVPISRT ENVANDNGAD IWSSSTFRGS  180
INLYST*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.14e-36bHLH family protein