PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2245
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 262aa    MW: 28607.4 Da    PI: 10.0426
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2245genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.31.3e-48461711127
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+evd+yk++Pw+Lp k++ +++ew +Fs+rd+ky++g r+nra++s
  evm.model.AsparagusV1_03.2245  46 LPPGFRFHPTDEELVVHYLKRKAASVPLPV-TIIAEVDLYKFDPWELPGKANLRRQEW-YFSPRDRKYPNGARPNRAATS 123
                                    79****************************.89***************8887777777.589****************** PP

                            NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                    gyWkatg+dk+++s+ ++++vg+kk Lvfy g+ pkg kt+W+mh++ 
  evm.model.AsparagusV1_03.2245 124 GYWKATGTDKPIMSSaSHKKVGVKKALVFYGGKPPKGIKTNWIMHDWM 171
                                    **************977888*************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MNGGASDFTS HRHRSRNDRY DDCINGEYRF VIGVSAAASG AAEPLLPPGF RFHPTDEELV  60
VHYLKRKAAS VPLPVTIIAE VDLYKFDPWE LPGKANLRRQ EWYFSPRDRK YPNGARPNRA  120
ATSGYWKATG TDKPIMSSAS HKKVGVKKAL VFYGGKPPKG IKTNWIMHDW MTGCCAESIR  180
KTAAAVMESS VTTITAAAVT VHTGCTSMIP WTTSCSPNHQ LPXXXXXXXX SSNKPAAATP  240
AEAAAGSASE RNHLQQRSAR Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.12e-71NAC family protein