PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2267
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 158aa    MW: 17180.2 Da    PI: 4.9914
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2267genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.93.7e-13741521599
                                    -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                             B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                                     +++p + a+e g++     + tl d+sg+sW v +i  +++g+  l+ GW++F   n L egD + F+     +  ++v
  evm.model.AsparagusV1_03.2267  74 HVRIPAEVAKEVGLIR----KTTLIDPSGKSWAVDII-LRSDGQLELGVGWSSFSVGNSLVEGDKCEFEIFA-GGDYMRV 147
                                    479*********9993....68999***********5.7888899************************654.5666899 PP

                                    EEE-S CS
                             B3  95 kvfrk 99 
                                    ++fr+
  evm.model.AsparagusV1_03.2267 148 HIFRA 152
                                    99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MQHDIQMDSQ SPASTSPSMI STNSVLDERP VDDKNIVPGL STSDDKESVP NAPERSESSH  60
PKFTIRLKLN HLYHVRIPAE VAKEVGLIRK TTLIDPSGKS WAVDIILRSD GQLELGVGWS  120
SFSVGNSLVE GDKCEFEIFA GGDYMRVHIF RADGGNA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-10B3 family protein