PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2269
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 174aa    MW: 19949.7 Da    PI: 8.6278
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2269genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.92.8e-1623981290
                                   HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                             B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                                    ++ l++p +f  +h g++ +++ +++++++gr+W++kl     +g  ++++GW++Fv+a  + egDf+vF +dg+ +f
  evm.model.AsparagusV1_03.2269 23 FTCSLRIPPEFK-KHLGETITQRPVVIRSSQGRRWRIKL--GIVGGNLYFRDGWERFVSASSVTEGDFLVFFYDGDFGF 98
                                   4577*******7.77444455667***************..999999*************************9997555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MGNPKSMSIL DRPSFFKVMI GDFTCSLRIP PEFKKHLGET ITQRPVVIRS SQGRRWRIKL  60
GIVGGNLYFR DGWERFVSAS SVTEGDFLVF FYDGDFGFDV IIYGTTCCSE ERVNIPGERD  120
KIEAESEDSD EEEPGSRREV RRKRKPKKMT NNRMRNGNES LLVICYWVTT TTT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-07B3 family protein