PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2270
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 422aa    MW: 47181.9 Da    PI: 8.924
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2270genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.14.8e-161194190
                                   EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                             B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81
                                   ffkv+     +++ ++++p +f  +h g+ + +++ ++++++ gr+W++k+     +g++++++GW++F  an + +gDf+v
  evm.model.AsparagusV1_03.2270 11 FFKVM--MGDFAT-QVRIPSEFK-KHlGE-SITQRSVVIRNSGGRQWRIKM--GIADGHVYFQNGWERFICANSITQGDFLV 85
                                   56666..444444.599*****7.66443.345568***************..***************************** PP

                                   EEE-SSSEE CS
                             B3 82 Fkldgrsef 90
                                   F +dg+ +f
  evm.model.AsparagusV1_03.2270 86 FFYDGKFGF 94
                                   **9885444 PP
2B355.88.1e-181892731199
                                    HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                             B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                                     +++ +++p + a+++++ ++   +++l+d++g sW v+l+ ++ + r  l++GW++    n+LkegD++v+++++  + 
  evm.model.AsparagusV1_03.2270 189 ARTNYMTIPLQLAKKCNLYEK--DEIILRDPHGTSWPVRLSTWRDG-RLCLSSGWSNIYGKNRLKEGDVCVLEFVQG-CS 264
                                    56788***********88744..48***************988885.889***********************9985.44 PP

                                    ..EEEEE-S CS
                             B3  91 elvvkvfrk 99 
                                      +v++fr+
  evm.model.AsparagusV1_03.2270 265 AINVHFFRA 273
                                    479999986 PP
3B330.85e-103304091197
                                    HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                             B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                                    l +  +++pkk a+e  +++   +  t+ d+sg+sW v +i  ++ g+  l+ G ++F + n+L egD + F+     + 
  evm.model.AsparagusV1_03.2270 330 LYH--VRIPKKVAKEARLSSC--QNTTIIDPSGKSWAVDII-LRSYGQLELGIGLSSFSRGNNLAEGDKCEFEIFA--GD 402
                                    333..79*********98854..467888***********7.55557899***********************543..22 PP

                                    ..EEEEE CS
                             B3  91 elvvkvf 97 
                                      +v+++
  evm.model.AsparagusV1_03.2270 403 YIRVHII 409
                                    2455555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MGNPKPNCPS FFKVMMGDFA TQVRIPSEFK KHLGESITQR SVVIRNSGGR QWRIKMGIAD  60
GHVYFQNGWE RFICANSITQ GDFLVFFYDG KFGFDVIIYG ATCCEKEACV DVPSEKVTIK  120
VESEGSGEEQ IVSPKGVGRK RKAKKMMTEN KMCYKVLRGA KPVANEKAMK AACAFKSPHP  180
HFVTTCRTAR TNYMTIPLQL AKKCNLYEKD EIILRDPHGT SWPVRLSTWR DGRLCLSSGW  240
SNIYGKNRLK EGDVCVLEFV QGCSAINVHF FRAEEYNAIS IPVSHERPGD IKESVSRPLT  300
ADYKESVANA PESSESSRPK FTILWNSNHL YHVRIPKKVA KEARLSSCQN TTIIDPSGKS  360
WAVDIILRSY GQLELGIGLS SFSRGNNLAE GDKCEFEIFA GDYIRVHIIR AGETNNSGTD  420
D*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.14e-23B3 family protein