PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.2814

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 424aa MW: 48518.6 Da PI: 8.2968

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.2814	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27	7.7e-09	259	296	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt qV +WF N R + evm.model.AsparagusV1_03.2814 259 FEHflHPYPKDSEKLMLARQTGLTRGQVANWFINARVR 296 664459******************************88 PP
2	BELL	105	4.9e-34	125	196	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er++lq++ +kLl + +eVd+rYkqy++q+q ++ssF+a+ag ++k+Yt+l l++iSrhFr Lkdai+++i evm.model.AsparagusV1_03.2814 125 ERHDLQNRVTKLLAMSDEVDRRYKQYYHQMQLIVSSFDAIAGPQASKLYTTLVLQTISRHFRFLKDAITSHI 196 799******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MASFYSNSTN QRDDVIPNLY LRGSSQILYP QNIPSKNSQD SFVRGRLNSS SCGVPNFMTS 60 IPNSKYFKAA QRLLDEVVNI RDALKKKADK SQNACGFGGG SRSDAVPPNP EESAVDHSTE 120 LPTSERHDLQ NRVTKLLAMS DEVDRRYKQY YHQMQLIVSS FDAIAGPQAS KLYTTLVLQT 180 ISRHFRFLKD AITSHIETTR KKLGEKEISS VGISRLRYID QQIRQQRAMQ HFGLMQSHTW 240 RPQRGLPENS VSTLRAWLFE HFLHPYPKDS EKLMLARQTG LTRGQVANWF INARVRLWKP 300 MIEEMYNQEF GEIEMDSKKE IKLTNEICEN INYKLDNVRY NDEYTNLQEQ KPHRENCDLL 360 QEALGRQVTE MSNYTNGVAF TLGLHQDVYG SVGLLGREDF EYTNTGTIGG NFVPSHLMHD 420 FAA*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MASFYSNSTN QRDDVIPNLY LRGSSQILYP QNIPSKNSQD SFVRGRLNSS SCGVPNFMTS  60
IPNSKYFKAA QRLLDEVVNI RDALKKKADK SQNACGFGGG SRSDAVPPNP EESAVDHSTE  120
LPTSERHDLQ NRVTKLLAMS DEVDRRYKQY YHQMQLIVSS FDAIAGPQAS KLYTTLVLQT  180
ISRHFRFLKD AITSHIETTR KKLGEKEISS VGISRLRYID QQIRQQRAMQ HFGLMQSHTW  240
RPQRGLPENS VSTLRAWLFE HFLHPYPKDS EKLMLARQTG LTRGQVANWF INARVRLWKP  300
MIEEMYNQEF GEIEMDSKKE IKLTNEICEN INYKLDNVRY NDEYTNLQEQ KPHRENCDLL  360
QEALGRQVTE MSNYTNGVAF TLGLHQDVYG SVGLLGREDF EYTNTGTIGG NFVPSHLMHD  420
FAA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-114	TALE family protein