PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2865
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GeBP
Protein Properties Length: 298aa    MW: 33249.1 Da    PI: 4.4256
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2865genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731002.2e-31109206297
                         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkeps 79 
                                    lfqr+ws eDei++L G+++f+ ++g      + i +f+efvk+s+s++vs sql+eKi+rLKkK++   ++a++gk ++
  evm.model.AsparagusV1_03.2865 109 LFQRIWSLEDEIAILEGMMEFEPERGPikLNAAGIRDFHEFVKGSLSLEVSGSQLLEKIKRLKKKYESIAARANNGKAVK 188
                                    69************************85445559********************************************** PP

                         DUF573  80 fskehdqkifelskkiWg 97 
                                    f k+hd+k++els+ +Wg
  evm.model.AsparagusV1_03.2865 189 FGKPHDKKVYELSMEVWG 206
                                    *****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAIKQPPPPP SPPPSSSEEE EESSSGEDEE TITKSPNSQT PTRNQEQEEE TDEESESGSS  60
DDEDDDEEDE DPPSDRRPQS ISTAASLPLK PFDAGDKSNG KGNANGKALF QRIWSLEDEI  120
AILEGMMEFE PERGPIKLNA AGIRDFHEFV KGSLSLEVSG SQLLEKIKRL KKKYESIAAR  180
ANNGKAVKFG KPHDKKVYEL SMEVWGMGNN NVANDAGGSL KREYPFIKDA MLDVRCCISA  240
ELLETLDPEK VRPLEREFKK QKVLEIKNRI RRIDLMKQAL QRVLEDVENM ADCIWGV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-22GeBP family protein