PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.2992

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

GRAS

Protein Properties

Length: 130aa MW: 14201.1 Da PI: 9.387

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.2992	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	124	1.7e-38	1	129	246	374
GRAS 246 adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325 ++ n+++F++rf ea++yy +++dsl+a ++re++ r +E + lgr+++n +acega+r+er e ++kWr+r+++aGF+ evm.model.AsparagusV1_03.2992 1 MNANTAPFATRFGEACNYYGSVLDSLDAVMSREDRSRFRIECA-LGRKASNSIACEGADRVERAEVFGKWRARMSMAGFR 79 588*************************************9.******************************** PP GRAS 326 pvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 pv+++++a++ +k +k + g+++ee+ g + +gW++r L+++SaWr evm.model.AsparagusV1_03.2992 80 PVQFGSDAVEAVKVRFGSMKaNPGFTLEEDAGRVGFGWMGRVLTVASAWR 129 ****************9**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence
MNANTAPFAT RFGEACNYYG SVLDSLDAVM SREDRSRFRI ECALGRKASN SIACEGADRV 60 ERAEVFGKWR ARMSMAGFRP VQFGSDAVEA VKVRFGSMKA NPGFTLEEDA GRVGFGWMGR 120 VLTVASAWR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52510.1	1e-41	GRAS family protein