PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.36

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 653aa MW: 72813.1 Da PI: 6.1105

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.36	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.8	1.7e-52	275	402	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 ++pGfrFhPtdeelv +yLk+k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+ evm.model.AsparagusV1_03.36 275 MMPGFRFHPTDEELVGFYLKRKIQQKPLSI-ELIRQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGF 355 579*************************.89***********8888999*********************** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg+d++++s+ +++ +glkk+Lvfykgra kg+ktdW+mhe+rl evm.model.AsparagusV1_03.36 356 WKATGTDRPIYSSeGTKCIGLKKSLVFYKGRAAKGTKTDWMMHEFRL 402 ********956667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MPAWSFTSLL ASLDACCAIY QQWGSDLNWP ILERWYVPWQ WQTVLLTMVS CGVSFALTGL 60 VEASALPYLG FQGGDVSLDE KAEILFAGQF TVTAVVLGVV YGITNRFQPL PDDLFRYDWK 120 EPFSLRNGWL LWAGIGLGGA IIAVALAGAV LTTFNGDPPQ READALVQLL PLIGSSGIST 180 ACLIGITGVL APVLEETVFR GFLVASLTKW FPSPVSILIS AAVFALAHLT PGEFPQLFAL 240 GNVFKLNNIH LRRKSYQGKK EMDERSDMEK ADEVMMPGFR FHPTDEELVG FYLKRKIQQK 300 PLSIELIRQL DIYKYDPWDL PKLATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG 360 TDRPIYSSEG TKCIGLKKSL VFYKGRAAKG TKTDWMMHEF RLPSLTDTSL PKRPLDKNIP 420 VNDSWAICRI FKKTNSMAQR ALSQSWVSPL PETNEPDFFS VAHTMNANQF GSENISCTTE 480 SGSSIQFSCN NGFQQQPSGL NYAPLNATNY NKPNNPMDCR SYPFPFSGVD MSTNFMFSGS 540 EMPLASMLLN LSPSILEEVE KSSASIEFGQ PQQCNGFTVD LPTEINSNLG SGEEKKSSNS 600 MIVNNNQWRT MRTFPFSLPS NISDEWKLNL PWDSPPCLSE MSTSFSTNKL YT*

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MPAWSFTSLL ASLDACCAIY QQWGSDLNWP ILERWYVPWQ WQTVLLTMVS CGVSFALTGL  60
VEASALPYLG FQGGDVSLDE KAEILFAGQF TVTAVVLGVV YGITNRFQPL PDDLFRYDWK  120
EPFSLRNGWL LWAGIGLGGA IIAVALAGAV LTTFNGDPPQ READALVQLL PLIGSSGIST  180
ACLIGITGVL APVLEETVFR GFLVASLTKW FPSPVSILIS AAVFALAHLT PGEFPQLFAL  240
GNVFKLNNIH LRRKSYQGKK EMDERSDMEK ADEVMMPGFR FHPTDEELVG FYLKRKIQQK  300
PLSIELIRQL DIYKYDPWDL PKLATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG  360
TDRPIYSSEG TKCIGLKKSL VFYKGRAAKG TKTDWMMHEF RLPSLTDTSL PKRPLDKNIP  420
VNDSWAICRI FKKTNSMAQR ALSQSWVSPL PETNEPDFFS VAHTMNANQF GSENISCTTE  480
SGSSIQFSCN NGFQQQPSGL NYAPLNATNY NKPNNPMDCR SYPFPFSGVD MSTNFMFSGS  540
EMPLASMLLN LSPSILEEVE KSSASIEFGQ PQQCNGFTVD LPTEINSNLG SGEEKKSSNS  600
MIVNNNQWRT MRTFPFSLPS NISDEWKLNL PWDSPPCLSE MSTSFSTNKL YT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-104	NAC family protein