PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.383
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 177aa    MW: 19379.1 Da    PI: 7.132
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.383genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.5e-132369354
                                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                  r+h+e+Er+RR+riNs +++Lr+++P+a      +++Ka+ L ++v+ +++L
  evm.model.AsparagusV1_03.383 23 RSHSEAERKRRQRINSHLATLRTIIPSA-----ARMDKATLLGEVVRQVREL 69
                                  79*************************8.....79*******9999887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEIVDVGSLI TEARSTVKTR AHRSHSEAER KRRQRINSHL ATLRTIIPSA ARMDKATLLG  60
EVVRQVRELH EMTEDVAVVV PTEADGVHVE EEGGLVRAWI CCPDRPGLLT DVDRAVGSVH  120
ARTVRAEIST IGGRTRSQLE LESESGVEED RSVLFAGLRS VLAGLVVGDQ CKRQRL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.15e-30bHLH family protein