PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.43
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ZF-HD
Protein Properties Length: 114aa    MW: 13170.9 Da    PI: 5.6793
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.43genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer65.87.8e-21656360
                  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                                  +rY eC+kNhAa++Gg+a+DGC+Efm++ geegt+aa+       HRnFHRr +e+e
  evm.model.AsparagusV1_03.43  6 VMRYAECQKNHAARVGGYALDGCREFMAD-GEEGTSAAM------LHRNFHRRVQEYE 56
                                 689*************************8.888777666......5********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MRRRRVMRYA ECQKNHAARV GGYALDGCRE FMADGEEGTS AAMLHRNFHR RVQEYESMCE  60
CAVTQNWWNE KFLLKRSEDL NDCINGSQCG LVQGVCNQCS MPFLVEEELN WEP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.13e-22ZF-HD family protein