PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.434
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 163aa    MW: 18581.1 Da    PI: 5.4511
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.434genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.97e-1886152267
                          FAR1   2 fYneYAkevGFsvrkskskksk.rngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 
                                   fYn+YA+++GF  r+ +s++sk  ++  ++++fvCskeg  +++ +++++++r+r + r gCka+++
  evm.model.AsparagusV1_03.434  86 FYNDYARRLGFPFRVGRSRRSKgVDEVLIMKRFVCSKEGVYRKKPSEETSRKRERLSMREGCKAMME 152
                                   *********************62567789************99999999*****************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MEASRSEGDD LIVDYVECLM SLPTNARSVE NENSVLQVSV PPEEPSRIPI GIPTQPKDLV  60
QITTEDSKLE PFLGMEFESD EAAKTFYNDY ARRLGFPFRV GRSRRSKGVD EVLIMKRFVC  120
SKEGVYRKKP SEETSRKRER LSMREGCKAM MESWLPSSER LH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-18FAR1 family protein