PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.530

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 469aa MW: 50739.5 Da PI: 8.7393

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.530	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.3	2.3e-16	165	202	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag +C e C+C++C+Nk evm.model.AsparagusV1_03.530 165 CKRCNCKKSKCLKLYCECFAAGIYCVEPCSCQGCFNKP 202 89**********************************96 PP
2	TCR	53.2	6e-17	249	287	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeCf+ g+ Cs +C+Ce+CkN evm.model.AsparagusV1_03.530 249 RHKRGCNCKKSSCLKKYCECFQGGVGCSASCRCEGCKNA 287 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MRRRCLTFEL AGGSTKNSNN NSKLHPSVSS LSSRKFTLDD KLSILSKPES SSSQRVLPGI 60 GLHLNTLATT PSDRMVTKET LAFGKRFISM PCSTSPFPPI TAVQKSVNKS LDVIKDEHPT 120 GSGVPGLEVT HDDASEAPAD GENLMQGSPK KKKRKSENGG ESEGCKRCNC KKSKCLKLYC 180 ECFAAGIYCV EPCSCQGCFN KPIHEETVLA TRKQIESRNP LAFAPKVIRA SKPVQDMAEE 240 TNKTPASARH KRGCNCKKSS CLKKYCECFQ GGVGCSASCR CEGCKNAFGR KDGAEAVHAE 300 DIMDVSEKQQ DEQQDGQQND IAQKNEHYSP ESILPITPSF ETCRPFVKPP FPSSGKPPRS 360 SALSACYPTS QTLRRCEFLS KPKTVDHSNS LANDDTPEIL RCDASPNNSV KIISPNGKRV 420 SPPHGALGIS PNRKGGRKLI LKSIPSFPSL NGDVSNEHPA SYSSDPLS*

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MRRRCLTFEL AGGSTKNSNN NSKLHPSVSS LSSRKFTLDD KLSILSKPES SSSQRVLPGI  60
GLHLNTLATT PSDRMVTKET LAFGKRFISM PCSTSPFPPI TAVQKSVNKS LDVIKDEHPT  120
GSGVPGLEVT HDDASEAPAD GENLMQGSPK KKKRKSENGG ESEGCKRCNC KKSKCLKLYC  180
ECFAAGIYCV EPCSCQGCFN KPIHEETVLA TRKQIESRNP LAFAPKVIRA SKPVQDMAEE  240
TNKTPASARH KRGCNCKKSS CLKKYCECFQ GGVGCSASCR CEGCKNAFGR KDGAEAVHAE  300
DIMDVSEKQQ DEQQDGQQND IAQKNEHYSP ESILPITPSF ETCRPFVKPP FPSSGKPPRS  360
SALSACYPTS QTLRRCEFLS KPKTVDHSNS LANDDTPEIL RCDASPNNSV KIISPNGKRV  420
SPPHGALGIS PNRKGGRKLI LKSIPSFPSL NGDVSNEHPA SYSSDPLS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	155	PKKKKRK
2	150	155	KKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-104	CPP family protein