PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.649
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 106aa    MW: 12004.7 Da    PI: 9.3964
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.649genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding445.2e-142267146
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                                  +g+W  eEde l+++v+++G+++W++I ++  + Rt+k+c++rw +
  evm.model.AsparagusV1_03.649 22 KGPWMSEEDEVLLEYVQRHGPRDWSSIRSKGLLPRTGKSCRLRWVN 67
                                  79*************************8876677**********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MQGAAKVSSK RVNDRCGATT RKGPWMSEED EVLLEYVQRH GPRDWSSIRS KGLLPRTGKS  60
CRLRWVNKLQ PNLKTDTLDF FAAASKVESR DSIDFLMLEF LDNCL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.16e-28MYB family protein