PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.668
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 305aa    MW: 35249.5 Da    PI: 5.8228
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.668genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.71.4e-50291572128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                    pGfrFhPtdeelv +yL++kv+++++++ e+ik++diyk++PwdLp  ++ ++ekewyfF+ r +ky+++ r+nr+t sg
  evm.model.AsparagusV1_03.668  29 LPGFRFHPTDEELVGFYLRRKVDNRPMTI-EIIKQIDIYKYDPWDLPkVSTVNGEKEWYFFCLRGRKYRNSIRPNRVTGSG 108
                                   69**************************9.89***************445556899************************* PP

                           NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +Wkatg d++++s+  ++  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  evm.model.AsparagusV1_03.668 109 FWKATGIDRPIHSAsgSDDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 157
                                   *************9544455***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEKKIASLEK KSEGKVEVEL VVEDEEEVLP GFRFHPTDEE LVGFYLRRKV DNRPMTIEII  60
KQIDIYKYDP WDLPKVSTVN GEKEWYFFCL RGRKYRNSIR PNRVTGSGFW KATGIDRPIH  120
SASGSDDCIG LKKSLVYYRG SAGKGTKTDW MMHEFRLPSN NKDNETCSPS LQEAEIWTIC  180
RIFKRNVSFK KYTQGWKQQA PKQTVATDSS SQTSSFDSDA RDEYKFVGYE NNQQNLYFEE  240
NNPLFGGQWS LNTSQTPTAT SLHPSIVPSP NTNEFLKEGN WDELGRIMEF YMMDQSATQE  300
CVYY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-86NAC family protein