PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.78

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

AP2

Protein Properties

Length: 198aa MW: 22555.2 Da PI: 7.1359

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.78	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.5	2.8e-12	21	71	10	55
AP2 10 kkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 k++g+++A+++d s+ g ++ k+++lg+++++e+Aa+a++ a++k++g evm.model.AsparagusV1_03.78 21 KWSGKFEAHLWDnTSQvEGrkRKgKHVYLGSYDSEEKAARAHDLAALKYWG 71 889*******666696675336***********************98 PP
2	AP2	54.1	3.7e-17	117	169	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++k +g+W A+I + g r k ++lg+f+t+eeAa+a++ a+ +l+g evm.model.AsparagusV1_03.78 117 AYRGVTRRK-DGKWQARIGRV---GeSRdaKDIYLGTFDTEEEAAEAYDLAAIELRG 169 69**999.9***998...443347***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MYDFCTFWKN GMSCEIDCRL KWSGKFEAHL WDNTSQVEGR KRKGKHVYLG SYDSEEKAAR 60 AHDLAALKYW GPTPSAKLNF PVSDYERELE TMKNMSQDEY VAHVRRQSSC FSRGASAYRG 120 VTRRKDGKWQ ARIGRVGESR DAKDIYLGTF DTEEEAAEAY DLAAIELRGV HAVTNFDMSN 180 YCDVKPSNLH CAIHPDC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-61	AP2 family protein