PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.79
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 231aa    MW: 25408.6 Da    PI: 7.0481
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.79genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.5e-053786154
                                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                 +++ + erE+  Rd++N  f eL + l +a   p + + Ka iL +A++ +++L
  evm.model.AsparagusV1_03.79 37 KKAHKAEREKLKRDQLNGLFLELGRALEPA---P-RNNGKACILDEATRILRDL 86
                                 577889***********************8...2.55999*******9999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVPELRASTT DCNMNVASEQ PVVGSLPSKK SQAKAPKKAH KAEREKLKRD QLNGLFLELG  60
RALEPAPRNN GKACILDEAT RILRDLILRV EGLRKESATL LTESRYVMVE KDELKDENLA  120
LAAEIARLNT ELQERQKSDD PTRHKTDTDP ALCTQTPVAP LYVLPFSQDL QPLSEAVIAP  180
SSPKPTTQVR RPHARYPTPS DSWPLQVLSR HQHSSSSSSS NSGDEGSEEA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.28e-31bHLH family protein