PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.908
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 228aa    MW: 25777.3 Da    PI: 6.3038
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.908genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.11.8e-1454100455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   ++ ++ErrRR+++N+++++Lr+l+P+      +K+sK ++L  A++YI++Lq
  evm.model.AsparagusV1_03.908  54 KNLAAERRRRSKLNHRLFTLRSLVPNI-----TKMSKESTLIDAMDYIHNLQ 100
                                   56689*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MPRWPRDQAM EFDVMNFADS MLDGCYGDGG GEGEFRKEQS AAAAEKGEER YKSKNLAAER  60
RRRSKLNHRL FTLRSLVPNI TKMSKESTLI DAMDYIHNLQ TQINDLKLEL SKICEEEDRT  120
KQGSTSSTES TAPPEMARYQ GRVELNPMGQ NKFHVKIMCN KRPGGFIKLL DALSRNGLEI  180
TEISSFAFSG FDQIVFCIEA RGDKEIPISE LRKLLMAIVE VSEENNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.12e-23bHLH family protein