PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.947
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 237aa    MW: 25859.4 Da    PI: 7.4169
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.947genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.2e-1180125554
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   +  rE+ RRdr+N++f eL ++l +     ++K +Ka+iL  Av+ + +L
  evm.model.AsparagusV1_03.947  80 KACREKMRRDRLNDKFLELGSILEPG----NPKTDKAAILSDAVRMVTQL 125
                                   678*******************9986....8**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MASPENSSWG FDYPLIDNIS VAGGDFGVPG NGLLWSPQGI NSTPSASMET GGNLVDSAAV  60
KESGFKKRVR SESGSVPGSK ACREKMRRDR LNDKFLELGS ILEPGNPKTD KAAILSDAVR  120
MVTQLRSEAQ KLKDSNENLM EKIKELKSEK NELRDEKQRL KQEKENLEQQ VKLLNSRPSF  180
MPHPPVIPAA FAPQGQTGTH KMMMPVIGYP GYPMWQFMPP ADVDTSQDAA SCPPVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-92bHLH family protein