PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1251

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 564aa MW: 64444.1 Da PI: 5.9999

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1251	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.3	8.5e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknrat 78 lppGfrFhPtdeelv++yL++k++++k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat evm.model.AsparagusV1_04.1251 6 LPPGFRFHPTDEELVTYYLERKINRRKIEL-EIIPEVDLYKCEPWDLPeKsLLPSKDLEWYFFSHRDRKYPNGSRTNRAT 84 79**************************.99**********95334455777****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + gyWkatgkd++v + +++ +g+kktLv+++grap+g++tdWvmheyrl evm.model.AsparagusV1_04.1251 85 QGGYWKATGKDRKVNA-QRRPTGTKKTLVYHRGRAPHGSRTDWVMHEYRL 133 ***********9.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MEPVTLPPGF RFHPTDEELV TYYLERKINR RKIELEIIPE VDLYKCEPWD LPEKSLLPSK 60 DLEWYFFSHR DRKYPNGSRT NRATQGGYWK ATGKDRKVNA QRRPTGTKKT LVYHRGRAPH 120 GSRTDWVMHE YRLDEKECET PSSGLQDAYA LCRVFKKSAP GPKIIEHYGV QSQLHPQWTT 180 INDHPSTVEI PRDGRGDEFE SRPYPFQPES CSSGVMQGTA YNSSPATLDH GKWMQFLAEE 240 AFNATNNVPF HNSSSSSSYV PSKVDVALEC ERLQHRFSMP ALQLEDFPQF DIQDSKLLDL 300 GFSTQLNTNE VEINELVNSS ISYPDTMWVA NMNPKFETYA SLVEPRHEKV SSVEISDLDE 360 EFKEDKRRVE NLRSVKTLDT VILQINLQGE HNAMANNIPI NRQIGVSTND DQGVTSYRLN 420 NSTDLGDNYT EQIYRQSQED KFPLGFINIH QEGVYQDNQL ADTPNLDVYE NIKFNHGLFM 480 SSSGEVAETF FHHVEPSKKI IVHLNQATVV DRSEEVRDKV SFFGRLKVGI KKSLKHCNDS 540 FLGNGILVLL HVISIALASC VYP*

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MEPVTLPPGF RFHPTDEELV TYYLERKINR RKIELEIIPE VDLYKCEPWD LPEKSLLPSK  60
DLEWYFFSHR DRKYPNGSRT NRATQGGYWK ATGKDRKVNA QRRPTGTKKT LVYHRGRAPH  120
GSRTDWVMHE YRLDEKECET PSSGLQDAYA LCRVFKKSAP GPKIIEHYGV QSQLHPQWTT  180
INDHPSTVEI PRDGRGDEFE SRPYPFQPES CSSGVMQGTA YNSSPATLDH GKWMQFLAEE  240
AFNATNNVPF HNSSSSSSYV PSKVDVALEC ERLQHRFSMP ALQLEDFPQF DIQDSKLLDL  300
GFSTQLNTNE VEINELVNSS ISYPDTMWVA NMNPKFETYA SLVEPRHEKV SSVEISDLDE  360
EFKEDKRRVE NLRSVKTLDT VILQINLQGE HNAMANNIPI NRQIGVSTND DQGVTSYRLN  420
NSTDLGDNYT EQIYRQSQED KFPLGFINIH QEGVYQDNQL ADTPNLDVYE NIKFNHGLFM  480
SSSGEVAETF FHHVEPSKKI IVHLNQATVV DRSEEVRDKV SFFGRLKVGI KKSLKHCNDS  540
FLGNGILVLL HVISIALASC VYP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-120	NAC family protein