PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1255
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 244aa    MW: 27972.5 Da    PI: 4.6876
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1255genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.61.4e-5461331128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknrat 78 
                                    lppGfrFhPtdeelv++yLk+k++g k+el ++i+evd+yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat
  evm.model.AsparagusV1_04.1255   6 LPPGFRFHPTDEELVNYYLKRKIHGLKIEL-DIIPEVDLYKCEPWELSdKsFLPSRDPEWYFFGPRDRKYPNGFRTNRAT 84 
                                    79****************************.99**************85335566888********************** PP

                            NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    ++gyWk+tgkd++v+s +++++g+kktLv+y+grap+g +tdWvmheyrl
  evm.model.AsparagusV1_04.1255  85 RAGYWKSTGKDRRVCS-QNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133
                                    ****************.8999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG LKIELDIIPE VDLYKCEPWE LSDKSFLPSR  60
DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVCS QNRAIGMKKT LVYYRGRAPQ  120
GIRTDWVMHE YRLDDKECED TMGMQDSYAL CRVFKKNVVC AEVEDQGQCS SIVLIESPQT  180
IVSDQYETMS PEVPIGSSPC IDEDDKDDAW MQFITEDAWC SNNEGGVDDE SIPHPSPCVA  240
FAN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-128NAC family protein