PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1388
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WOX
Protein Properties Length: 240aa    MW: 26909.6 Da    PI: 8.3215
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1388genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.85.9e-2197157257
                                    T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                       Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                    r+R+t+t+ ql++Le++F +   +ps+++++eL+++l    +++e++V++WFqNrRa+ k+
  evm.model.AsparagusV1_04.1388  97 RQRWTPTPAQLQILESVFSQgIGTPSKQKIKELTSELlqhgKISETNVYNWFQNRRARSKR 157
                                    89*****************99**************************************97 PP
2Wus_type_Homeobox98.74.5e-3296159265
              Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                                    +r+RWtPtp Q++iLe+++++G+ tP+k++i+++t+eL ++Gki+++NV++WFQNr+aR+++k+
  evm.model.AsparagusV1_04.1388  96 SRQRWTPTPAQLQILESVFSQGIGTPSKQKIKELTSELLQHGKISETNVYNWFQNRRARSKRKH 159
                                    789***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDWPKASPSS SSSNRNIGDH IKREVDELMM MMGPVKVMTD EQIEVLRQQI SMFAAICEQL  60
VEMHKSMTSP QSVIAGTSFQ YYDPLMMPGS TPKITSRQRW TPTPAQLQIL ESVFSQGIGT  120
PSKQKIKELT SELLQHGKIS ETNVYNWFQN RRARSKRKHA ATPSCLSVKS EAERENDCSN  180
LVKQKSGKID SFQIPEGNPE LHSTKNAEDS LRSFYQGQDQ LMGEMGIPAG LSYFQCGNR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.12e-54WOX family protein