PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1519
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 222aa    MW: 25183.5 Da    PI: 9.1548
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1519genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.16.6e-4481331128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrkn.ratk 79 
                                    lppGfrFhPtdeelvveyLkkk+ + +l++  +i+++d  + +PwdLp +   ++ e yfF  ++ +y+++ r+n rat 
  evm.model.AsparagusV1_04.1519   8 LPPGFRFHPTDEELVVEYLKKKAMSCPLPA-AIISDIDFRSRDPWDLPGC---HDGERYFFNLQEANYRKSGRSNiRATM 83 
                                    79***************************9.88***************54...66799***********97777626*** PP

                            NAM  80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    sgyWkatg++k++l++  +e vg+kk+Lvf++g+ p+g++t+Wvmheyrl
  evm.model.AsparagusV1_04.1519  84 SGYWKATGREKTILCSkLNEIVGMKKVLVFHQGKPPHGVRTHWVMHEYRL 133
                                    *************99845677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEKLIMRLPP GFRFHPTDEE LVVEYLKKKA MSCPLPAAII SDIDFRSRDP WDLPGCHDGE  60
RYFFNLQEAN YRKSGRSNIR ATMSGYWKAT GREKTILCSK LNEIVGMKKV LVFHQGKPPH  120
GVRTHWVMHE YRLAGPDQTK NPSQQQYSLV QGQNWVVSRI FMKKKGTSKM KENTVQCYSN  180
SRAGDDRNNH GDFGPQSPPS SCVTDLSDEE EGSKGEEANS K*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-63NAC family protein