PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1557

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 250aa MW: 27089.9 Da PI: 8.4843

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1557	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.6e-12	62	104	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L evm.model.AsparagusV1_04.1557 62 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 104 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MTAALTRSGL NYDSDDFAPD NNSAGRKLDE SDGKNGSEGK VTGGGGEREG KIEGVLPAKN 60 LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIEY LKELLQRIND LHNELESTPS 120 SSALPTPTGS SFHPLTPTLP TLPSRVKEEL CPSSLPSPTG QQARVEVRVR EGRAVNIHMF 180 CARRPGLLLS TMRALDGLGL DIQQAVISCF NGFALDVFRA EQLKDGPGVM PEEIKAVLLH 240 SAGLQNAMQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	71	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	9e-82	bHLH family protein