PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1653

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 164aa MW: 17605 Da PI: 9.8234

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1653	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	43.8	5e-14	85	118	1	33
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCp 33 ldDg++WrK qK vkg+++prsYY+Ct+ Cp evm.model.AsparagusV1_04.1653 85 LDDGCRWRKCRQKAVKGNPNPRSYYKCTTVaFCP 118 59**************************975675 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MVGNVSPPAR SPQGAGRLQR GASTSRGPRR HGQGVRDYAI VISHNPDNGT SSKNEGENEG 60 ISVIGNQTVR EPRVVVQTTS DIDILDDGCR WRKCRQKAVK GNPNPRSYYK CTTVAFCPHY 120 PIGCQQLPFA HIIPLAPQAG SLLKLATGLV FYIAGNGVFC SLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-24	WRKY family protein