PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1684
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 184aa    MW: 20246.5 Da    PI: 4.5918
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1684genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.5e-055779123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                   y+C+ C + F++   L  H+++H
  evm.model.AsparagusV1_04.1684 57 YTCNFCRREFRSAQALGGHMNVH 79
                                   9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MAAELGLFSL TQLQNLAQQQ QQQQRRPANE EDDSWEVRAF AEDTSSSMGT TWPPRSYTCN  60
FCRREFRSAQ ALGGHMNVHR RDRARLRQPP QVPEPPPVMI PSGEFVANGG LCLFYPVPNS  120
SSTFLSVSAY EQAVNLPTSS MNLGESLLGK VGMVRDASEG RDASSNDDGG IVEELDLELR  180
LGW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.13e-32C2H2 family protein