PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1698
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 220aa    MW: 24478.1 Da    PI: 8.4872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1698genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.5e-11250455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                   +h ++Er+RR+ +N+ ++ Lr+l+P++   + ++ + a+++  A++++k+L+
  evm.model.AsparagusV1_04.1698  2 THIAVERNRRRLMNEHLAVLRSLMPES---YIQRGDQASVVGGAIDFVKELE 50
                                   8**************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MTHIAVERNR RRLMNEHLAV LRSLMPESYI QRGDQASVVG GAIDFVKELE QHLQSLEVQK  60
RTLQQQKRTK AEESLSRAAE PVTSTKNRDE NEQAPFGQFF AYPQYTWCHS PSEYPPPMPD  120
TPSAADTLKV TVMKSRMTNL RILTPRPRQL LKMVAGLQAL RLSVLHLNVT TLDSMVLYSI  180
SVKVEEGCSL TTVDDIAAAV HHISGTVSVA DAFCKGPVH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-59bHLH family protein